Core Technologies

Advanced analytical technologies for comprehensive protein characterization

4.8

Conventional Differential Scanning Fluorimetry (DSF) uses a real-time PCR instrument to monitor thermally induced protein denaturation by measuring changes in fluorescence of a dye that binds preferentially to unfolded protein (such as Sypro Orange, which binds to hydrophobic regions of proteins exposed by unfolding). This experiment is also known as a Protein Thermal Shift Assay, because shifts in the apparent melting temperature can be measured upon the addition of stabilizing or destabilizing binding partners or buffer components.

DSF Protein Thermal Stability Analysis

ConFix integrates three complementary analytical technologies — Differential Scanning Fluorimetry (DSF), Dynamic Light Scattering (DLS), and Static Light Scattering (SLS) — into a single platform for comprehensive protein characterization.

Fluorescent Dyes in DSF

In addition to FITC, Sypro Orange is another widely utilized fluorescent probe in DSF technology, commonly employed in the biomedical field for conducting molecular interaction studies and drug screening.

Technical Limitations

However, these techniques still share some common drawbacks, such as limitations in detergent or surfactant compatibility and non-selective binding to other hydrophobic reagents.

Detergent/surfactant compatibility issues
Non-selective binding to hydrophobic reagents
Competitive binding with endogenous proteins
Impact on molecular interaction accuracy

New Generation DSF

New generation DSF is a modified differential scanning fluorimetry method which monitors intrinsic tryptophan and tyrosine fluorescence as a function of temperature, time, or denaturant concentration.

Key Advantages

Broader Sample Range

Can be used for a broader range of protein samples than traditional DSF

Higher Throughput

Significantly higher throughput and lower sample consumption than DSC or CD

Comparable Accuracy

Free energies of folding and temperatures of unfolding comparable to DSC values

Label-Free Detection

Monitors intrinsic tryptophan and tyrosine fluorescence without external dyes

DSF Experiment Plot

An idealized plot from a differential scanning fluorimetry (DSF) experiment. At low temperature, the target protein is folded and the dye's fluorescence is quenched. As the temperature increases, the protein unfolds, revealing hydrophobic residues. The half maximal of the fluorescence vs temperature plot is the apparent melting temperature (Tma), which is an indication of the protein's relative stability.